Irresistible Keto Pumpkin Cream Cheese Muffins Recipe: Guilt-Free Indulgence

Welcome to Fall Flavors: Keto Pumpkin Cream Cheese Muffins

As the leaves begin to turn and the air gets crisper, there’s nothing quite like the warm embrace of fall flavors. And what could be more quintessentially autumn than the combination of pumpkin and cream cheese? That’s where our Keto Pumpkin Cream Cheese Muffins come into play. These muffins are not only a celebration of the season but also a perfect match for anyone following a ketogenic diet.

Imagine biting into a moist muffin that’s bursting with the taste of pumpkin spice, and then getting that rich, creamy surprise of cream cheese in the center. It’s a festive treat that you can enjoy without any guilt. These muffins are low in carbs and high in healthy fats, making them an ideal snack or dessert for those on a keto diet. Let’s dive into this delicious recipe that will surely become a fall favorite!

Keto Pumpkin Cream Cheese Muffins

The Story Behind the Muffins

When it comes to keto baking, the challenge is always how to recreate the flavors and textures we love without the high-carb ingredients. This recipe for Keto Pumpkin Cream Cheese Muffins is the result of much experimentation and a desire to bring the joy of fall’s flavors to a keto-friendly treat.

The key to these muffins is in their ingredients. Almond flour provides a low-carb base, replacing traditional wheat flour without sacrificing texture. Pumpkin puree adds not only flavor but also moisture, which is often lacking in keto baked goods. The addition of warm spices like cinnamon, nutmeg, and ginger evoke that classic pumpkin pie taste, while erythritol sweetens the deal without adding to the carb count.

But let’s not forget the star of the show: the cream cheese filling. Cream cheese is a keto staple, offering both fat and flavor. In these muffins, it creates a luscious, creamy core that contrasts beautifully with the spiced pumpkin batter. It’s a combination that’s not only delicious but also provides the fat needed to keep you in ketosis.

These muffins are more than just a treat; they’re a testament to the versatility and creativity possible within a keto diet. They prove that you don’t have to give up your favorite flavors when you choose to live a low-carb lifestyle.

Cream Cheese Filling Preparation

Perfecting the Muffin Method

Making these Keto Pumpkin Cream Cheese Muffins is straightforward, but a few chef’s tips can elevate them from good to great.

First, when mixing your dry ingredients, ensure they are well combined before adding the wet ingredients. This helps to distribute the spices evenly and prevents clumping. When it comes to adding the wet ingredients, don’t overmix. Stir until just combined to keep the muffins tender.

Second, when preparing the cream cheese filling, having your cream cheese at room temperature is crucial. This ensures a smooth, lump-free filling that’s easy to swirl into your muffin batter. Speaking of swirling, use a light hand to create beautiful marbling in the muffins. You want pockets of cream cheese, not a complete blend.

Finally, watch the muffins closely as they bake. Keto baked goods can go from perfectly done to overcooked quickly due to their unique ingredients. They’re ready when a toothpick comes out clean, but they should still have a slight give to the touch.

By following these tips, you’ll end up with muffins that are not only keto-friendly but also a delight to the senses.

Baked Keto Pumpkin Cream Cheese Muffins

Variations to the Classic

Chocolate Chip Pumpkin Muffins

For a little extra indulgence, fold sugar-free chocolate chips into the batter before baking. The chocolate adds a rich depth to the pumpkin flavor and makes the muffins feel even more like a treat.

Nutty Pumpkin Muffins

Adding chopped pecans or walnuts to the batter provides a delightful crunch and ups the fat content, making these muffins even more keto-friendly. The nuts also complement the pumpkin and spices beautifully.

Spicy Pumpkin Muffins

If you’re a fan of heat, try adding a pinch of cayenne pepper to the batter. It’ll give your muffins a surprising kick that balances sweet and spicy in every bite.

Substitutions for Special Diets

While these muffins are keto-friendly, you may have other dietary considerations. Here are some substitutions to meet your needs:

Dairy-Free: Replace the butter with coconut oil and use a dairy-free cream cheese alternative. This will maintain the richness of the muffins while keeping them dairy-free.

Nut-Free: If you’re allergic to almonds, try using sunflower seed flour in place of almond flour. It’s a nut-free alternative that behaves similarly in baking.

Sugar-Free Sweeteners: While erythritol is used here, you can substitute with other keto-friendly sweeteners like monk fruit or stevia. Be sure to adjust the quantity based on sweetness levels.

Frequently Asked Questions

Can I use canned pumpkin pie filling instead of pumpkin puree? No, canned pumpkin pie filling contains added sugars and spices. Stick to pure pumpkin puree to control the carb count and spice levels.

How do I store these muffins? Store them in an airtight container in the refrigerator for up to 5 days. You can also freeze them for up to 3 months.

Can I make these muffins nut-free? Yes, you can use sunflower seed flour as a nut-free alternative to almond flour.

Are these muffins diabetic-friendly? Yes, they are low in carbs and sugar, making them suitable for a diabetic diet. However, always consult with your doctor regarding your specific dietary needs.

Can I make these muffins without a muffin tin? You can use silicone muffin cups placed on a baking sheet if you don’t have a muffin tin.

Keto Pumpkin Cream Cheese Muffins

Indulge in the rich, autumnal flavors of pumpkin and cream cheese with these Keto Pumpkin Cream Cheese Muffins. Perfectly moist, these muffins combine the warm spices of the season with a luscious cream cheese filling, all while maintaining a low-carb profile suitable for a ketogenic lifestyle.
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Prep Time 15 minutes
Cook Time 20 minutes
Total Time 35 minutes
Course Desserts
Cuisine American
Servings 12 muffins
Calories 200 kcal


  • Mixing bowls
  • Muffin tin
  • Silicone or parchment paper muffin liners
  • Whisk
  • Measuring cups and spoons
  • Toothpick or knife


Muffin Batter

  • 1 ½ cups almond flour 150g
  • ½ cup pumpkin puree 122g
  • ¾ cup granulated erythritol 144g
  • 3 large eggs
  • ¼ cup unsalted butter, melted 57g
  • 1 tsp baking powder 4g
  • ½ tsp ground cinnamon
  • ¼ tsp ground nutmeg
  • ¼ tsp ground ginger
  • ¼ tsp salt 1.5g

Cream Cheese Filling

  • 6 oz cream cheese, softened 170g
  • 1 large egg
  • 2 tbsp granulated erythritol 24g
  • ½ tsp vanilla extract


  • Preheat your oven to 350°F (175°C) and line a muffin tin with 12 silicone or parchment paper muffin liners.
  • In a large mixing bowl, combine almond flour, erythritol, baking powder, cinnamon, nutmeg, ginger, and salt. Whisk together until well mixed.
  • Add the pumpkin puree, melted butter, and eggs to the dry ingredients. Stir until the batter is smooth and there are no lumps.
  • Prepare the cream cheese filling by mixing the softened cream cheese, egg, erythritol, and vanilla extract in a separate bowl until smooth and creamy.
  • Fill each muffin liner with about two tablespoons of the muffin batter. Then, add a dollop (about one tablespoon) of the cream cheese mixture on top of the batter.
  • Using a toothpick or a knife, swirl the cream cheese mixture into the batter to create a marbled effect.
  • Bake in the preheated oven for 20 minutes or until a toothpick inserted into the center of a muffin comes out clean.
  • Allow the muffins to cool in the pan for 5 minutes before transferring them to a wire rack to cool completely.


Store leftover muffins in an airtight container in the refrigerator for up to 5 days.
These muffins can be frozen for up to 3 months. Thaw overnight in the refrigerator before serving.
Make sure all ingredients are at room temperature to ensure even mixing and the best texture.
For a dairy-free version, replace the butter with coconut oil and use a dairy-free cream cheese alternative.


Calories: 200kcalCarbohydrates: 5gProtein: 6gFat: 18gFiber: 3gNet Carbs: 2g
Keyword Keto Cream Cheese Muffins, Keto Pumpkin Muffins, Low Carb Pumpkin Muffins
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